HSA: integrating multi-track Hi-C data for genome-scale

Integrating Hi-C and FISH data for modeling of the 3D organization of chromosomes

Computational methods for analysing multiscale 3D genome organization

Towards system genetics analysis of head and neck squamous cell carcinoma using the mouse model, cellular platform, and clinical human data - Zohud - Animal Models and Experimental Medicine - Wiley Online Library

An Overview of Genome Organization and How We Got There: from FISH to Hi-C

Sci-Hi-C: a single-cell Hi-C method for mapping 3D genome organization in large number of single cells

Comparing 3D Genome Organization in Multiple Species Using Phylo-HMRF - ScienceDirect

Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes

Generative modeling of multi-mapping reads with mHi-C advances analysis of Hi-C studies

The three dimensional organization of the nucleus

Integrated Transcriptome Profiling Identifies Prognostic Hub Genes as Therapeutic Targets of Glioblastoma: Evidenced by Bioinformatics Analysis

Hierarchical Reconstruction of High-Resolution 3D Models of Large Chromosomes

Frontiers Unraveling the transcriptomic signatures of Parkinson's disease and major depression using single-cell and bulk data